Source Coverage Matrix

Purpose

This page tracks source-file coverage for the LMDZ.MARS wiki. It is a project-management coverage matrix, not a reader-facing source index. reference/file-index.md remains the reader-facing index for pages that already exist.

Scan Scope

Source root: LMDZ.MARS
Included files: *.F, *.F90, *.f, *.f90
Matrix management scope: the existing 233-row coverage set, covering libf/aeronomars, libf/dynphy_lonlat, matrix-managed libf/phymars, libf/phymars/dyn1d, and selected util sources. Full repository expansion is left to a separate maintenance pass.
Total matrix source files: 233
Wiki Markdown pages scanned: 262
Source-file existence check: passed
Direct coverage rule: has_page now requires an exact-stem file page, an explicit helper/routine page that is the primary reproduction page for that source, or an explicit directory page for a small multi-file tool. Theme pages, directory overview mentions, and reference/file-index.md mentions alone count only as mentioned_only.
Status definitions:
- has_page: a wiki page directly documents this file, helper pair, routine, or small tool directory enough to reproduce the source logic.
- mentioned_only: the file is mentioned by an existing page but does not appear to have its own direct reproduction page.
- uncovered: no wiki mention was found by filename/stem search.

Coverage Summary

Status	Count
`has_page`	233
`mentioned_only`	0
`uncovered`	0

Coverage By Directory

Directory group	has_page	total
`libf/aeronomars`	32	32
`libf/dynphy_lonlat`	21	21
`libf/phymars`	145	145
`libf/phymars/dyn1d`	17	17
`util`	18	18

Remaining Priority Buckets

Priority	Meaning	Count
`P1`	strict direct-page gaps for core physics/theme files	0
`P2`	other phymars support/config direct-page gaps	0
`P3`	aeronomy or dynamics coupling files	0
`P4`	util tools	0
`P5`	low-priority 1D or miscellaneous files	0

Scope Reconciliation Notes

A broad physical scan under the source root finds more Fortran files than this matrix because this matrix preserves the narrower management scope used by earlier wiki phases.
libf/phymars is counted without recursively double-counting libf/phymars/dyn1d; dyn1d remains a separate directory group.
Current physical scan counts for the matrix-style groups are:

Directory group	Physical Fortran files found	Matrix rows	Note
`libf/aeronomars`	32	32	matches matrix scope
`libf/dynphy_lonlat`	21	21	matches matrix scope
`libf/phymars`	145	145	matches matrix scope
`libf/phymars/dyn1d`	17	17	matches matrix scope
`util`	18	18	matches matrix scope

Full Matrix

Source file	Directory group	Status	Suggested priority	Direct page(s)	Mention examples
`libf/aeronomars/calchim_mod.F90`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/calchim_mod.md	modules/aeronomars/index.md, modules/libf-overview.md
`libf/aeronomars/chemistrydata.F90`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/chemistrydata.md	modules/aeronomars/index.md, modules/phymars/datafile_mod.md
`libf/aeronomars/chemthermos.F90`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/chemthermos.md	modules/aeronomars/index.md, modules/libf-overview.md
`libf/aeronomars/chemthermos_readini.F`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/chemthermos_readini.md	modules/aeronomars/index.md, reference/reaction-rates.md
`libf/aeronomars/conduction.F`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/conduction.md	modules/aeronomars/index.md
`libf/aeronomars/deposition.F`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/deposition.md	modules/aeronomars/index.md, modules/libf-overview.md
`libf/aeronomars/euvheat.F90`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/euvheat.md	modules/aeronomars/index.md, modules/libf-overview.md
`libf/aeronomars/hrtherm.F`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/hrtherm.md	modules/aeronomars/index.md
`libf/aeronomars/inichim_newstart.F90`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/inichim_newstart.md	modules/aeronomars/index.md, modules/phymars/datafile_mod.md
`libf/aeronomars/intrplf.F`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/intrplf.md	modules/aeronomars/index.md
`libf/aeronomars/iono_h.F90`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/iono_h.md	modules/aeronomars/index.md, modules/libf-overview.md
`libf/aeronomars/jthermcalc.F`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/jthermcalc.md	modules/aeronomars/index.md
`libf/aeronomars/jthermcalc_e107_mod.F`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/jthermcalc_e107_mod.md	modules/aeronomars/index.md
`libf/aeronomars/jthermcalc_util.F`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/jthermcalc_util.md	modules/aeronomars/index.md
`libf/aeronomars/moldiff.F`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/moldiff.md	modules/aeronomars/index.md, modules/libf-overview.md
`libf/aeronomars/moldiff_MPF.F90`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/moldiff_MPF.md	modules/aeronomars/index.md, modules/phymars/planetwide_mod.md
`libf/aeronomars/moldiff_red.F90`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/moldiff_red.md	modules/phymars/planetwide_mod.md
`libf/aeronomars/moldiffcoeff.F`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/moldiffcoeff.md	modules/aeronomars/index.md, modules/libf-overview.md
`libf/aeronomars/moldiffcoeff_red.F`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/moldiffcoeff_red.md	modules/aeronomars/index.md
`libf/aeronomars/molvis.F`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/molvis.md	modules/aeronomars/index.md, modules/aeronomars/conduction.md
`libf/aeronomars/param_read.F`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/param_read.md	modules/aeronomars/index.md, modules/phymars/datafile_mod.md, modules/aeronomars/hrtherm.md
`libf/aeronomars/param_read_e107.F`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/param_read_e107.md	modules/aeronomars/index.md, modules/phymars/physiq_mod.md, modules/phymars/datafile_mod.md
`libf/aeronomars/param_v4_h.F90`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/param_v4_h.md	modules/aeronomars/index.md, modules/aeronomars/hrtherm.md, modules/aeronomars/param_read_e107.md, modules/phymars/physiq_mod.md, reference/reaction-rates.md
`libf/aeronomars/paramfoto_compact.F`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/paramfoto_compact.md	modules/aeronomars/index.md, reference/reaction-rates.md, modules/aeronomars/chemthermos.md, modules/aeronomars/param_read_e107.md
`libf/aeronomars/perosat.F`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/perosat.md	modules/aeronomars/index.md, modules/aeronomars/calchim_mod.md, reference/file-index.md, reference/symbol-index.md
`libf/aeronomars/photochemistry_mod.F90`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/photochemistry_mod.md	modules/aeronomars/index.md, modules/aeronomars/calchim_mod.md, modules/aeronomars/chemistrydata.md, modules/aeronomars/paramfoto_compact.md, modules/aeronomars/iono_h.md
`libf/aeronomars/photolysis.F90`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/photolysis.md	modules/aeronomars/index.md, modules/aeronomars/photochemistry_mod.md, modules/aeronomars/chemistrydata.md
`libf/aeronomars/photolysis_mod.F90`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/photolysis_mod.md	modules/aeronomars/index.md, modules/libf-overview.md, modules/phymars/datafile_mod.md
`libf/aeronomars/photolysis_online.F`	`libf/aeronomars`	`has_page`	`covered`	modules/aeronomars/photolysis_online.md	modules/aeronomars/index.md, modules/libf-overview.md
`libf/aeronomars/surfacearea.F`	`libf/aeronomars`	`has_page`	`covered`	modules/aeronomars/surfacearea.md	modules/aeronomars/index.md, modules/phymars/physiq_mod.md
`libf/aeronomars/thermosphere_mod.F`	`libf/aeronomars`	`has_page`	`covered`	modules/aeronomars/thermosphere_mod.md	modules/aeronomars/index.md, modules/phymars/physiq_mod.md
`libf/aeronomars/types_asis.F90`	`libf/aeronomars`	`has_page`	`P3`	modules/aeronomars/types_asis.md	modules/aeronomars/index.md, modules/aeronomars/photochemistry_mod.md
`libf/dynphy_lonlat/phymars/avg_horiz_mod.F`	`libf/dynphy_lonlat`	`has_page`	`covered`	modules/dynphy_lonlat/avg_horiz_mod.md	modules/dynphy_lonlat/index.md
`libf/dynphy_lonlat/phymars/caldyn0.F`	`libf/dynphy_lonlat`	`has_page`	`covered`	modules/dynphy_lonlat/caldyn0.md	modules/dynphy_lonlat/index.md
`libf/dynphy_lonlat/phymars/callphysiq_mod.F90`	`libf/dynphy_lonlat`	`has_page`	`covered`	modules/dynphy_lonlat/callphysiq_mod.md	modules/dynphy_lonlat/index.md, modules/libf-overview.md
`libf/dynphy_lonlat/phymars/datareadnc.F`	`libf/dynphy_lonlat`	`has_page`	`covered`	modules/dynphy_lonlat/datareadnc.md	modules/dynphy_lonlat/index.md, modules/phymars/datafile_mod.md
`libf/dynphy_lonlat/phymars/defrun_new.F`	`libf/dynphy_lonlat`	`has_page`	`covered`	modules/dynphy_lonlat/defrun_new.md	modules/dynphy_lonlat/index.md, modules/libf-overview.md
`libf/dynphy_lonlat/phymars/grid_noro1.F`	`libf/dynphy_lonlat`	`has_page`	`covered`	modules/dynphy_lonlat/grid_noro1.md	modules/dynphy_lonlat/index.md
`libf/dynphy_lonlat/phymars/ini_archive.F`	`libf/dynphy_lonlat`	`has_page`	`covered`	modules/dynphy_lonlat/ini_archive.md	modules/dynphy_lonlat/index.md, modules/libf-overview.md, modules/phymars/def_var.md
`libf/dynphy_lonlat/phymars/iniphysiq_mod.F90`	`libf/dynphy_lonlat`	`has_page`	`covered`	modules/dynphy_lonlat/iniphysiq_mod.md	modules/dynphy_lonlat/index.md, modules/libf-overview.md, modules/phymars/comgeomfi_h.md, modules/phymars/phys_state_var_init_mod.md
`libf/dynphy_lonlat/phymars/interp_vert.F`	`libf/dynphy_lonlat`	`has_page`	`covered`	modules/dynphy_lonlat/interp_vert.md	modules/dynphy_lonlat/index.md
`libf/dynphy_lonlat/phymars/leapfrog_nogcm.F`	`libf/dynphy_lonlat`	`has_page`	`covered`	modules/dynphy_lonlat/leapfrog_nogcm.md	modules/dynphy_lonlat/index.md
`libf/dynphy_lonlat/phymars/lect_start_archive.F`	`libf/dynphy_lonlat`	`has_page`	`covered`	modules/dynphy_lonlat/lect_start_archive.md	modules/dynphy_lonlat/index.md, modules/phymars/comsoil_h.md, modules/phymars/interp_line.md, modules/phymars/solarlong.md
`libf/dynphy_lonlat/phymars/mvc_horiz_mod.F`	`libf/dynphy_lonlat`	`has_page`	`covered`	modules/dynphy_lonlat/mvc_horiz_mod.md	modules/dynphy_lonlat/index.md, modules/dynphy_lonlat/datareadnc.md
`libf/dynphy_lonlat/phymars/newstart.F`	`libf/dynphy_lonlat`	`has_page`	`covered`	modules/dynphy_lonlat/newstart.md	modules/aeronomars/index.md, modules/dynphy_lonlat/index.md, modules/phymars/comsoil_h.md, modules/phymars/datafile_mod.md, modules/phymars/paleoclimate_mod.md
`libf/dynphy_lonlat/phymars/nogcm.F90`	`libf/dynphy_lonlat`	`has_page`	`covered`	modules/dynphy_lonlat/nogcm.md	modules/dynphy_lonlat/index.md, modules/libf-overview.md
`libf/dynphy_lonlat/phymars/readhead_NC.F`	`libf/dynphy_lonlat`	`has_page`	`covered`	modules/dynphy_lonlat/readhead_NC.md	modules/dynphy_lonlat/index.md
`libf/dynphy_lonlat/phymars/scal_wind.F`	`libf/dynphy_lonlat`	`has_page`	`covered`	modules/dynphy_lonlat/scal_wind.md	modules/dynphy_lonlat/index.md, modules/dynphy_lonlat/lect_start_archive.md
`libf/dynphy_lonlat/phymars/start2archive.F`	`libf/dynphy_lonlat`	`has_page`	`covered`	modules/dynphy_lonlat/start2archive.md	modules/dynphy_lonlat/index.md, modules/libf-overview.md, modules/phymars/comsoil_h.md
`libf/dynphy_lonlat/phymars/subslope_mola.F90`	`libf/dynphy_lonlat`	`has_page`	`covered`	modules/dynphy_lonlat/subslope_mola.md	modules/dynphy_lonlat/index.md, modules/dynphy_lonlat/newstart.md
`libf/dynphy_lonlat/phymars/wind_scal.F`	`libf/dynphy_lonlat`	`has_page`	`covered`	modules/dynphy_lonlat/wind_scal.md	modules/dynphy_lonlat/index.md, modules/dynphy_lonlat/start2archive.md
`libf/dynphy_lonlat/phymars/write_archive.F`	`libf/dynphy_lonlat`	`has_page`	`covered`	modules/dynphy_lonlat/write_archive.md	modules/dynphy_lonlat/index.md, modules/dynphy_lonlat/start2archive.md, modules/phymars/def_var.md
`libf/dynphy_lonlat/phymars/xvik.F`	`libf/dynphy_lonlat`	`has_page`	`covered`	modules/dynphy_lonlat/xvik.md	modules/dynphy_lonlat/index.md, modules/dynphy_lonlat/readhead_NC.md, modules/util/index.md
`libf/phymars/aerave.F`	`libf/phymars`	`has_page`	`covered`	aerave.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/aeropacity_mod.F`	`libf/phymars`	`has_page`	`covered`	aeropacity_mod.md	modules/phymars/calcstormfract_mod.md, modules/phymars/comgeomfi_h.md, modules/phymars/index.md, reference/file-index.md, themes/dust-cycle.md
`libf/phymars/aeroptproperties.F`	`libf/phymars`	`has_page`	`covered`	aeroptproperties.md	modules/phymars/index.md, reference/file-index.md, themes/dust-cycle.md, themes/radiation.md
`libf/phymars/albedocaps.F90`	`libf/phymars`	`has_page`	`covered`	albedocaps.md	modules/phymars/datafile_mod.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/blendrad.F`	`libf/phymars`	`has_page`	`covered`	blendrad.md	modules/phymars/index.md, modules/phymars/nlteparams_h.md, modules/phymars/nlthermeq.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/calcstormfract_mod.F90`	`libf/phymars`	`has_page`	`covered`	calcstormfract_mod.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/call_dayperi.F`	`libf/phymars`	`has_page`	`covered`	call_dayperi.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/calldrag_noro_mod.F90`	`libf/phymars`	`has_page`	`covered`	calldrag_noro_mod.md	modules/phymars/drag_noro_mod.md, modules/phymars/index.md, modules/phymars/sugwd.md, modules/phymars/yoegwd_h.md, reference/file-index.md
`libf/phymars/callkeys_mod.F90`	`libf/phymars`	`has_page`	`covered`	callkeys_mod.md	modules/phymars/convadj.md, modules/phymars/suaer.md, modules/phymars/updatereffrad_mod.md, reference/file-index.md, routines/initracer-co2-tracers.md, themes/radiation.md
`libf/phymars/callradite_mod.F`	`libf/phymars`	`has_page`	`covered`	callradite_mod.md	architecture/project-structure.md, modules/libf-overview.md, modules/phymars/aeropacity_mod.md, modules/phymars/aeroptproperties.md, modules/phymars/calcstormfract_mod.md, modules/phymars/index.md, modules/phymars/nlthermeq.md, modules/phymars/physiq_mod.md, modules/phymars/suaer.md, modules/phymars/updatereffrad_mod.md, reference/file-index.md, reference/symbol-index.md, themes/radiation.md
`libf/phymars/callsedim_mod.F`	`libf/phymars`	`has_page`	`covered`	callsedim_mod.md	modules/phymars/newsedim_mod.md, modules/phymars/rocketduststorm_mod.md, modules/phymars/updaterad.md, modules/phymars/vlz_fi.md, reference/file-index.md
`libf/phymars/calltherm_interface_mod.F90`	`libf/phymars`	`has_page`	`covered`	calltherm_interface_mod.md	modules/phymars/comtherm_h.md, modules/phymars/index.md, modules/phymars/thermcell_dqup.md, modules/phymars/thermcell_main_mars.md, modules/phymars/turb_mod.md
`libf/phymars/check_fields.F90`	`libf/phymars`	`has_page`	`covered`	check_fields.md	modules/phymars/dimphy.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/co2cloud_mod.F90`	`libf/phymars`	`has_page`	`covered`	co2cloud_mod.md	modules/libf-overview.md, modules/phymars/co2-saturation-helpers.md, modules/phymars/datafile_mod.md, modules/phymars/density_co2_ice.md, modules/phymars/index.md
`libf/phymars/co2condens_mod.F`	`libf/phymars`	`has_page`	`covered`	co2condens-scavenging.md, co2condens.md	architecture/co2-cycle-config.md, modules/libf-overview.md, modules/phymars/co2snow.md, modules/phymars/index.md, modules/phymars/planete_h.md
`libf/phymars/co2sat.F`	`libf/phymars`	`has_page`	`covered`	co2-saturation-helpers.md	modules/libf-overview.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, themes/co2-cycle.md
`libf/phymars/co2snow.F`	`libf/phymars`	`has_page`	`covered`	co2snow.md	modules/libf-overview.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, themes/co2-cycle.md
`libf/phymars/comcstfi_h.F90`	`libf/phymars`	`has_page`	`covered`	comcstfi_h.md	modules/phymars/index.md, modules/phymars/newsedim_mod.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/comgeomfi_h.F90`	`libf/phymars`	`has_page`	`covered`	comgeomfi_h.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/comm_wrf.F90`	`libf/phymars`	`has_page`	`covered`	comm_wrf.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/compute_dtau_mod.F90`	`libf/phymars`	`has_page`	`covered`	compute_dtau_mod.md	modules/phymars/index.md, modules/phymars/rocketduststorm_mod.md, reference/file-index.md, themes/dust-cycle.md
`libf/phymars/comsaison_h.F90`	`libf/phymars`	`has_page`	`covered`	comsaison_h.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/comslope_mod.F90`	`libf/phymars`	`has_page`	`covered`	comslope_mod.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/comsoil_h.F90`	`libf/phymars`	`has_page`	`covered`	comsoil_h.md	modules/phymars/index.md, modules/phymars/waterice_tifeedback_mod.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/comtherm_h.F90`	`libf/phymars`	`has_page`	`covered`	comtherm_h.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/conc_mod.F90`	`libf/phymars`	`has_page`	`covered`	conc_mod.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/conf_phys.F`	`libf/phymars`	`has_page`	`covered`	conf_phys.md	architecture/co2-cycle-config.md, architecture/water-cycle-config.md, modules/phymars/callkeys_mod.md, modules/phymars/index.md, reference/file-index.md
`libf/phymars/convadj.F`	`libf/phymars`	`has_page`	`covered`	convadj.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/cvmgt.F`	`libf/phymars`	`has_page`	`covered`	cvmgt.md	modules/phymars/index.md, modules/phymars/swr_fouquart.md, modules/phymars/swr_toon.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/datafile_mod.F90`	`libf/phymars`	`has_page`	`covered`	datafile_mod.md	modules/phymars/albedocaps.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/def_var.F90`	`libf/phymars`	`has_page`	`covered`	def_var.md	modules/phymars/index.md, modules/phymars/iniwrite.md, modules/phymars/writediagfi.md, modules/phymars/writediagmicrofi.md, modules/phymars/writediagsoil.md
`libf/phymars/density_co2_ice.F90`	`libf/phymars`	`has_page`	`covered`	density_co2_ice.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, themes/co2-cycle.md
`libf/phymars/dimphy.F90`	`libf/phymars`	`has_page`	`covered`	dimphy.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/dimradmars_mod.F90`	`libf/phymars`	`has_page`	`covered`	dimradmars_mod.md	modules/phymars/index.md, modules/phymars/lwb.md, modules/phymars/lwdiff.md, reference/file-index.md, themes/radiation.md
`libf/phymars/drag_noro_mod.F90`	`libf/phymars`	`has_page`	`covered`	drag_noro_mod.md	modules/phymars/calldrag_noro_mod.md, modules/phymars/index.md, modules/phymars/sugwd.md, modules/phymars/yoegwd_h.md, reference/file-index.md
`libf/phymars/dust_coagulation_mod.F90`	`libf/phymars`	`has_page`	`covered`	dust_coagulation_mod.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, routines/dust_coagulation_main.md, themes/dust-cycle.md
`libf/phymars/dust_param_mod.F90`	`libf/phymars`	`has_page`	`covered`	dust_param_mod.md	modules/libf-overview.md, modules/phymars/index.md, reference/file-index.md, themes/dust-cycle.md, themes/radiation.md
`libf/phymars/dust_rad_adjust_mod.F90`	`libf/phymars`	`has_page`	`covered`	dust_rad_adjust_mod.md	modules/phymars/index.md, reference/file-index.md, themes/dust-cycle.md
`libf/phymars/dust_scaling_mod.F90`	`libf/phymars`	`has_page`	`covered`	dust_scaling_mod.md	modules/libf-overview.md, modules/phymars/index.md, reference/file-index.md, themes/dust-cycle.md
`libf/phymars/dust_windstress_lift.F90`	`libf/phymars`	`has_page`	`covered`	dust_windstress_lift.md	modules/libf-overview.md, modules/phymars/index.md, reference/file-index.md, themes/dust-cycle.md, themes/radiation.md
`libf/phymars/dustdevil.F90`	`libf/phymars`	`has_page`	`covered`	dustdevil.md	modules/libf-overview.md, modules/phymars/index.md, reference/file-index.md, themes/dust-cycle.md
`libf/phymars/dyn1d/abort_gcm.F`	`libf/phymars/dyn1d`	`has_page`	`covered`	abort_gcm.md	modules/phymars/dyn1d/index.md, modules/phymars/index.md, modules/phymars/topmons_mod.md, modules/phymars/vlz_fi.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/dyn1d/comconst_mod.F90`	`libf/phymars/dyn1d`	`has_page`	`covered`	comconst_mod.md	modules/phymars/dyn1d/index.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/dyn1d/comvert_mod.F90`	`libf/phymars/dyn1d`	`has_page`	`covered`	comvert_mod.md	modules/phymars/dyn1d/index.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, architecture/testphys1d-config.md
`libf/phymars/dyn1d/control_mod.F90`	`libf/phymars/dyn1d`	`has_page`	`covered`	control_mod.md	modules/phymars/dyn1d/index.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/dyn1d/disvert_noterre.F`	`libf/phymars/dyn1d`	`has_page`	`covered`	disvert_noterre.md	modules/phymars/dyn1d/index.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, modules/phymars/dyn1d/comvert_mod.md
`libf/phymars/dyn1d/ener_mod.F90`	`libf/phymars/dyn1d`	`has_page`	`covered`	ener_mod.md	modules/phymars/dyn1d/index.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/dyn1d/infotrac.F90`	`libf/phymars/dyn1d`	`has_page`	`covered`	infotrac.md	modules/phymars/dyn1d/index.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, architecture/water-cycle-config.md
`libf/phymars/dyn1d/init_testphys1d_mod.F90`	`libf/phymars/dyn1d`	`has_page`	`covered`	init_testphys1d_mod.md	architecture/testphys1d-config.md, modules/phymars/dyn1d/index.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, modules/phymars/call_dayperi.md, modules/phymars/comcstfi_h.md, modules/phymars/comgeomfi_h.md
`libf/phymars/dyn1d/logic_mod.F90`	`libf/phymars/dyn1d`	`has_page`	`covered`	logic_mod.md	modules/phymars/dyn1d/index.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, modules/phymars/dyn1d/init_testphys1d_mod.md
`libf/phymars/dyn1d/mod_const_mpi.F90`	`libf/phymars/dyn1d`	`has_page`	`covered`	mod_const_mpi.md	modules/phymars/dyn1d/index.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, modules/phymars/dyn1d/init_testphys1d_mod.md
`libf/phymars/dyn1d/mod_interface_dyn_phys.F90`	`libf/phymars/dyn1d`	`has_page`	`covered`	mod_interface_dyn_phys.md	modules/phymars/dyn1d/index.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, modules/phymars/dyn1d/init_testphys1d_mod.md
`libf/phymars/dyn1d/parallel_lmdz.F90`	`libf/phymars/dyn1d`	`has_page`	`P5`	parallel_lmdz.md	modules/phymars/dyn1d/index.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/dyn1d/profile_temp_mod.F90`	`libf/phymars/dyn1d`	`has_page`	`P5`	profile_temp_mod.md	modules/phymars/dyn1d/index.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, architecture/testphys1d-config.md
`libf/phymars/dyn1d/read_profile_mod.F90`	`libf/phymars/dyn1d`	`has_page`	`P5`	read_profile_mod.md	modules/phymars/dyn1d/index.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, modules/phymars/dyn1d/init_testphys1d_mod.md
`libf/phymars/dyn1d/serre_mod.F90`	`libf/phymars/dyn1d`	`has_page`	`P5`	serre_mod.md	modules/phymars/dyn1d/index.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, modules/dynphy_lonlat/defrun_new.md
`libf/phymars/dyn1d/testphys1d.F90`	`libf/phymars/dyn1d`	`has_page`	`P5`	testphys1d.md	architecture/testphys1d-config.md, architecture/z2sig-config.md, modules/phymars/phyredem.md, modules/phymars/solarlong.md, modules/phymars/turb_mod.md, modules/phymars/dyn1d/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/dyn1d/writerestart1D_mod.F90`	`libf/phymars/dyn1d`	`has_page`	`P5`	writerestart1D_mod.md	architecture/testphys1d-config.md, modules/phymars/dyn1d/testphys1d.md, modules/phymars/dyn1d/init_testphys1d_mod.md, modules/phymars/dyn1d/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/flusv.F`	`libf/phymars`	`has_page`	`covered`	flusv.md	modules/phymars/index.md, modules/phymars/lwdiff.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/geticecover.F90`	`libf/phymars`	`has_page`	`covered`	geticecover.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/growthrate.F`	`libf/phymars`	`has_page`	`covered`	growthrate.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/gwprofil_mod.F90`	`libf/phymars`	`has_page`	`covered`	gwprofil_mod.md	modules/libf-overview.md, modules/phymars/index.md, modules/phymars/orodrag_mod.md, modules/phymars/yoegwd_h.md, reference/file-index.md
`libf/phymars/gwstress_mod.F90`	`libf/phymars`	`has_page`	`covered`	gwstress_mod.md	modules/libf-overview.md, modules/phymars/index.md, modules/phymars/orodrag_mod.md, modules/phymars/yoegwd_h.md, reference/file-index.md
`libf/phymars/hdo_surfex_mod.F`	`libf/phymars`	`has_page`	`covered`	hdo_surfex_mod.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/improvedclouds_mod.F90`	`libf/phymars`	`has_page`	`covered`	improvedclouds_mod.md	modules/phymars/growthrate.md, modules/phymars/index.md, modules/phymars/microphys_h.md, modules/phymars/nuclea.md, modules/phymars/sig_h2o.md
`libf/phymars/improvedco2clouds_mod.F90`	`libf/phymars`	`has_page`	`covered`	improvedco2clouds_mod.md	modules/phymars/co2-saturation-helpers.md, modules/phymars/datafile_mod.md, modules/phymars/index.md, modules/phymars/massflowrateco2.md, modules/phymars/nucleaco2.md
`libf/phymars/initracer.F90`	`libf/phymars`	`has_page`	`covered`	initracer.md	architecture/co2-cycle-config.md, architecture/water-cycle-config.md, modules/libf-overview.md, modules/phymars/index.md, modules/phymars/tracer_mod.md
`libf/phymars/iniwrite.F`	`libf/phymars`	`has_page`	`covered`	iniwrite.md	modules/phymars/comcstfi_h.md, modules/phymars/def_var.md, modules/phymars/index.md, modules/phymars/writediagfi.md, modules/phymars/writediagmicrofi.md
`libf/phymars/iniwritesoil.F90`	`libf/phymars`	`has_page`	`covered`	iniwritesoil.md	modules/phymars/index.md, modules/phymars/writediagsoil.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/interp_line.F`	`libf/phymars`	`has_page`	`covered`	interp_line.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/iostart.F90`	`libf/phymars`	`has_page`	`covered`	iostart.md	modules/phymars/dimphy.md, modules/phymars/index.md, modules/phymars/phyetat0_mod.md, modules/phymars/phyredem.md, reference/file-index.md
`libf/phymars/lmdz_atke_exchange_coeff.F90`	`libf/phymars`	`has_page`	`covered`	lmdz_atke_exchange_coeff.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/lmdz_atke_turbulence_ini.F90`	`libf/phymars`	`has_page`	`covered`	lmdz_atke_turbulence_ini.md	modules/libf-overview.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/lmdz_call_atke.F90`	`libf/phymars`	`has_page`	`covered`	lmdz_call_atke.md	modules/libf-overview.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/lwb.F`	`libf/phymars`	`has_page`	`covered`	lwb.md	modules/phymars/index.md, modules/phymars/lwdiff.md, reference/file-index.md, reference/symbol-index.md, themes/radiation.md
`libf/phymars/lwdiff.F`	`libf/phymars`	`has_page`	`covered`	lwdiff.md	modules/phymars/flusv.md, modules/phymars/index.md, modules/phymars/lwflux.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/lwflux.F`	`libf/phymars`	`has_page`	`covered`	lwflux.md	modules/phymars/index.md, modules/phymars/lwdiff.md, reference/file-index.md, reference/symbol-index.md, themes/radiation.md
`libf/phymars/lwi.F`	`libf/phymars`	`has_page`	`covered`	lwi.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, themes/radiation.md
`libf/phymars/lwmain_mod.F`	`libf/phymars`	`has_page`	`covered`	lwmain_mod.md	modules/libf-overview.md, modules/phymars/callradite_mod.md, modules/phymars/index.md, modules/phymars/lwb.md, modules/phymars/lwdiff.md, modules/phymars/lwflux.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/lwtt.F`	`libf/phymars`	`has_page`	`covered`	lwtt.md	modules/phymars/index.md, modules/phymars/lwxb.md, modules/phymars/lwxd.md, modules/phymars/lwxn.md, reference/file-index.md
`libf/phymars/lwu.F`	`libf/phymars`	`has_page`	`covered`	lwu.md	modules/phymars/index.md, modules/phymars/lwtt.md, reference/file-index.md, reference/symbol-index.md, themes/radiation.md
`libf/phymars/lwxb.F`	`libf/phymars`	`has_page`	`covered`	lwxb.md	modules/phymars/index.md, modules/phymars/lwtt.md, reference/file-index.md, reference/symbol-index.md, themes/radiation.md
`libf/phymars/lwxd.F`	`libf/phymars`	`has_page`	`covered`	lwxd.md	modules/phymars/index.md, modules/phymars/lwtt.md, modules/phymars/lwxn.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/lwxn.F`	`libf/phymars`	`has_page`	`covered`	lwxn.md	modules/phymars/index.md, modules/phymars/lwtt.md, modules/phymars/lwxd.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/massflowrateco2.F90`	`libf/phymars`	`has_page`	`covered`	massflowrateco2.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, themes/co2-cycle.md
`libf/phymars/microphys_h.F90`	`libf/phymars`	`has_page`	`covered`	microphys_h.md	modules/phymars/index.md, modules/phymars/massflowrateco2.md, modules/phymars/nucleaco2.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/mucorr.F`	`libf/phymars`	`has_page`	`covered`	mucorr.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/newsedim_mod.F`	`libf/phymars`	`has_page`	`covered`	newsedim_mod.md	modules/phymars/index.md, modules/phymars/vlz_fi.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/nirco2abs.F`	`libf/phymars`	`has_page`	`covered`	nirco2abs.md	modules/phymars/comgeomfi_h.md, modules/phymars/index.md, modules/phymars/mucorr.md, modules/phymars/nirdata.md, modules/phymars/solang.md
`libf/phymars/nirdata.F90`	`libf/phymars`	`has_page`	`covered`	nirdata.md	modules/phymars/datafile_mod.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/nlte_aux.F`	`libf/phymars`	`has_page`	`covered`	nlte_aux.md	modules/libf-overview.md, modules/phymars/index.md, modules/phymars/nlte_calc.md, modules/phymars/nlte_commons_h.md, modules/phymars/nlte_paramdef_h.md
`libf/phymars/nlte_calc.F`	`libf/phymars`	`has_page`	`covered`	nlte_calc.md	modules/libf-overview.md, modules/phymars/index.md, modules/phymars/nlte_aux.md, modules/phymars/nlte_commons_h.md, modules/phymars/nlte_paramdef_h.md
`libf/phymars/nlte_commons_h.F90`	`libf/phymars`	`has_page`	`covered`	nlte_commons_h.md	modules/phymars/index.md, modules/phymars/nlte_calc.md, modules/phymars/nlte_paramdef_h.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/nlte_paramdef_h.F90`	`libf/phymars`	`has_page`	`covered`	nlte_paramdef_h.md	modules/phymars/index.md, modules/phymars/nlte_calc.md, modules/phymars/nlte_commons_h.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/nlte_setup.F`	`libf/phymars`	`has_page`	`covered`	nlte_setup.md	modules/phymars/datafile_mod.md, modules/phymars/index.md, modules/phymars/nlte_aux.md, modules/phymars/nlte_calc.md, modules/phymars/nlte_commons_h.md
`libf/phymars/nlte_tcool_mod.F`	`libf/phymars`	`has_page`	`covered`	nlte_tcool_mod.md	modules/phymars/conc_mod.md, modules/phymars/index.md, modules/phymars/nlte_aux.md, modules/phymars/nlte_calc.md, modules/phymars/nlte_commons_h.md
`libf/phymars/nltecool.F`	`libf/phymars`	`has_page`	`covered`	nltecool.md	modules/phymars/conc_mod.md, modules/phymars/index.md, modules/phymars/nlthermeq.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/nlteparams_h.F90`	`libf/phymars`	`has_page`	`covered`	nlteparams_h.md	modules/phymars/index.md, modules/phymars/nlthermeq.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/nlthermeq.F`	`libf/phymars`	`has_page`	`covered`	nlthermeq.md	modules/phymars/index.md, modules/phymars/nlteparams_h.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/nonoro_gwd_mix_mod.F90`	`libf/phymars`	`has_page`	`covered`	nonoro_gwd_mix_mod.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/nonoro_gwd_ran_mod.F90`	`libf/phymars`	`has_page`	`covered`	nonoro_gwd_ran_mod.md	modules/phymars/index.md, modules/phymars/nonoro_gwd_mix_mod.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/nuclea.F`	`libf/phymars`	`has_page`	`covered`	nuclea.md	modules/phymars/index.md, modules/phymars/sig_h2o.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/nucleaco2.F90`	`libf/phymars`	`has_page`	`covered`	nucleaco2.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, themes/co2-cycle.md
`libf/phymars/orbite.F`	`libf/phymars`	`has_page`	`covered`	orbite.md	modules/phymars/index.md, modules/phymars/planete_h.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/orodrag_mod.F90`	`libf/phymars`	`has_page`	`covered`	orodrag_mod.md	modules/phymars/drag_noro_mod.md, modules/phymars/gwprofil_mod.md, modules/phymars/gwstress_mod.md, modules/phymars/index.md, modules/phymars/orosetup.md
`libf/phymars/orosetup.F90`	`libf/phymars`	`has_page`	`covered`	orosetup.md	modules/phymars/drag_noro_mod.md, modules/phymars/gwstress_mod.md, modules/phymars/index.md, modules/phymars/orodrag_mod.md, modules/phymars/yoegwd_h.md
`libf/phymars/paleoclimate_mod.F90`	`libf/phymars`	`has_page`	`covered`	paleoclimate_mod.md	modules/phymars/albedocaps.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/parse_tracer_file.F90`	`libf/phymars`	`has_page`	`covered`	parse_tracer_file.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/parse_traceur_file.F90`	`libf/phymars`	`has_page`	`covered`	parse_traceur_file.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/pbl_parameters_mod.F90`	`libf/phymars`	`has_page`	`covered`	pbl_parameters_mod.md	modules/phymars/index.md, modules/phymars/paleoclimate_mod.md, modules/phymars/turb_mod.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/phyetat0_mod.F90`	`libf/phymars`	`has_page`	`covered`	phyetat0_mod.md	modules/libf-overview.md, modules/phymars/comslope_mod.md, modules/phymars/comsoil_h.md, modules/phymars/index.md, modules/phymars/iostart.md
`libf/phymars/phyredem.F90`	`libf/phymars`	`has_page`	`covered`	phyredem.md	modules/libf-overview.md, modules/phymars/co2snow.md, modules/phymars/comsoil_h.md, modules/phymars/index.md, modules/phymars/iostart.md
`libf/phymars/phys_state_var_init_mod.F90`	`libf/phymars`	`has_page`	`covered`	phys_state_var_init_mod.md	modules/libf-overview.md, modules/phymars/comcstfi_h.md, modules/phymars/comgeomfi_h.md, modules/phymars/comsaison_h.md, modules/phymars/comslope_mod.md
`libf/phymars/physiq_mod.F`	`libf/phymars`	`has_page`	`covered`	physiq_mod.md	architecture/co2-cycle-config.md, architecture/project-structure.md, architecture/testphys1d-config.md, architecture/water-cycle-config.md, modules/dynphy_lonlat/index.md, reference/file-index.md
`libf/phymars/planete_h.F90`	`libf/phymars`	`has_page`	`covered`	planete_h.md	modules/phymars/call_dayperi.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/planetwide_mod.F90`	`libf/phymars`	`has_page`	`covered`	planetwide_mod.md	modules/phymars/dimphy.md, modules/phymars/index.md, modules/phymars/thermcell_main_mars.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/read_dust_scenario_mod.F90`	`libf/phymars`	`has_page`	`covered`	read_dust_scenario_mod.md	modules/phymars/datafile_mod.md, modules/phymars/planete_h.md, reference/file-index.md, themes/dust-cycle.md
`libf/phymars/rocketduststorm_mod.F90`	`libf/phymars`	`has_page`	`covered`	rocketduststorm_mod.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, themes/dust-cycle.md
`libf/phymars/sig_h2o.F90`	`libf/phymars`	`has_page`	`covered`	sig_h2o.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/simpleclouds_mod.F`	`libf/phymars`	`has_page`	`covered`	simpleclouds_mod.md	modules/phymars/index.md, modules/phymars/updaterad.md, reference/file-index.md, reference/symbol-index.md, themes/water-cycle.md
`libf/phymars/slope_mod.F90`	`libf/phymars`	`has_page`	`covered`	slope_mod.md	modules/phymars/comslope_mod.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/soil.F`	`libf/phymars`	`has_page`	`covered`	soil.md	modules/phymars/comsoil_h.md, modules/phymars/def_var.md, modules/phymars/index.md, modules/phymars/iniwritesoil.md, modules/phymars/write_output_mod.md
`libf/phymars/soil_settings.F`	`libf/phymars`	`has_page`	`covered`	soil_settings.md	modules/phymars/comsoil_h.md, modules/phymars/index.md, modules/phymars/interp_line.md, modules/phymars/iostart.md, modules/phymars/phyetat0_mod.md
`libf/phymars/soilwater.F90`	`libf/phymars`	`has_page`	`covered`	soilwater.md	modules/phymars/comsoil_h.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, themes/water-cycle.md
`libf/phymars/solang.F`	`libf/phymars`	`has_page`	`covered`	solang.md	modules/phymars/comgeomfi_h.md, modules/phymars/comsaison_h.md, modules/phymars/index.md, modules/phymars/orbite.md, reference/file-index.md
`libf/phymars/solarlong.F`	`libf/phymars`	`has_page`	`covered`	solarlong.md	modules/phymars/call_dayperi.md, modules/phymars/comsaison_h.md, modules/phymars/index.md, modules/phymars/orbite.md, modules/phymars/planete_h.md
`libf/phymars/suaer.F90`	`libf/phymars`	`has_page`	`covered`	suaer.md	modules/phymars/aerave.md, modules/phymars/aeroptproperties.md, modules/phymars/datafile_mod.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, themes/dust-cycle.md, themes/radiation.md
`libf/phymars/sugwd.F90`	`libf/phymars`	`has_page`	`covered`	sugwd.md	architecture/z2sig-config.md, modules/libf-overview.md, modules/phymars/index.md, modules/phymars/yoegwd_h.md, reference/file-index.md
`libf/phymars/surfdat_h.F90`	`libf/phymars`	`has_page`	`covered`	surfdat_h.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/surfini_mod.F90`	`libf/phymars`	`has_page`	`covered`	surfini_mod.md	modules/phymars/comsoil_h.md, modules/phymars/index.md, modules/phymars/surfdat_h.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/swmain_mod.F`	`libf/phymars`	`has_page`	`covered`	swmain_mod.md	modules/libf-overview.md, modules/phymars/callradite_mod.md, modules/phymars/index.md, modules/phymars/swr_fouquart.md, modules/phymars/swr_toon.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/swr_fouquart.F`	`libf/phymars`	`has_page`	`covered`	swr_fouquart.md	modules/phymars/cvmgt.md, modules/phymars/index.md, modules/phymars/swrayleigh.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/swr_toon.F`	`libf/phymars`	`has_page`	`covered`	swr_toon.md	modules/phymars/cvmgt.md, modules/phymars/index.md, modules/phymars/swrayleigh.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/swrayleigh.F`	`libf/phymars`	`has_page`	`covered`	swrayleigh.md	modules/phymars/index.md, modules/phymars/swr_fouquart.md, modules/phymars/swr_toon.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/tabfi.F`	`libf/phymars`	`has_page`	`covered`	tabfi.md	modules/phymars/co2snow.md, modules/phymars/comcstfi_h.md, modules/phymars/comsoil_h.md, modules/phymars/index.md, modules/phymars/orbite.md
`libf/phymars/tcondco2.F90`	`libf/phymars`	`has_page`	`covered`	co2-saturation-helpers.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, themes/co2-cycle.md
`libf/phymars/tcondwater.F90`	`libf/phymars`	`has_page`	`covered`	water-saturation-helpers.md	modules/libf-overview.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, themes/water-cycle.md
`libf/phymars/thermcell_dqup.F90`	`libf/phymars`	`has_page`	`covered`	thermcell_dqup.md	modules/phymars/calltherm_interface_mod.md, modules/phymars/index.md, modules/phymars/thermcell_main_mars.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/thermcell_main_mars.F90`	`libf/phymars`	`has_page`	`covered`	thermcell_main_mars.md	modules/libf-overview.md, modules/phymars/calltherm_interface_mod.md, modules/phymars/comtherm_h.md, modules/phymars/index.md, modules/phymars/planetwide_mod.md
`libf/phymars/time_phylmdz_mod.F90`	`libf/phymars`	`has_page`	`covered`	time_phylmdz_mod.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/topmons_mod.F90`	`libf/phymars`	`has_page`	`covered`	topmons_mod.md	modules/phymars/index.md, modules/phymars/planetwide_mod.md, modules/phymars/surfdat_h.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/tracer_mass_fixer_dyn_mod.F90`	`libf/phymars`	`has_page`	`covered`	tracer_mass_fixer_dyn_mod.md	modules/phymars/index.md, modules/phymars/planetwide_mod.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/tracer_mod.F90`	`libf/phymars`	`has_page`	`covered`	tracer_mod.md	modules/libf-overview.md, modules/phymars/hdo_surfex_mod.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/turb_mod.F90`	`libf/phymars`	`has_page`	`covered`	turb_mod.md	modules/libf-overview.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, themes/radiation.md
`libf/phymars/updaterad.F90`	`libf/phymars`	`has_page`	`covered`	updaterad.md	modules/phymars/growthrate.md, reference/file-index.md, reference/symbol-index.md, themes/dust-cycle.md
`libf/phymars/updatereffrad_mod.F`	`libf/phymars`	`has_page`	`covered`	updatereffrad_mod.md	modules/phymars/aeroptproperties.md, modules/phymars/index.md, modules/phymars/suaer.md, modules/phymars/updaterad.md, reference/file-index.md, reference/symbol-index.md, themes/co2-cycle.md, themes/dust-cycle.md, themes/radiation.md, themes/water-cycle.md
`libf/phymars/vdif_cd_mod.F90`	`libf/phymars`	`has_page`	`covered`	vdif_cd_mod.md	modules/phymars/index.md, modules/phymars/paleoclimate_mod.md, modules/phymars/turb_mod.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/vdif_kc.F`	`libf/phymars`	`has_page`	`covered`	vdif_kc.md	modules/phymars/index.md, modules/phymars/turb_mod.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/vdifc_mod.F`	`libf/phymars`	`has_page`	`covered`	vdifc_mod.md	modules/phymars/comslope_mod.md, modules/phymars/comsoil_h.md, modules/phymars/conc_mod.md, modules/phymars/hdo_surfex_mod.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, routines/vdifc-water-surface-exchange.md, themes/dust-cycle.md, themes/water-cycle.md
`libf/phymars/vlz_fi.F`	`libf/phymars`	`has_page`	`covered`	vlz_fi.md	modules/phymars/newsedim_mod.md, modules/phymars/rocketduststorm_mod.md, modules/phymars/topmons_mod.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/watercloud_mod.F`	`libf/phymars`	`has_page`	`covered`	watercloud_mod.md	modules/libf-overview.md, modules/phymars/improvedclouds_mod.md, modules/phymars/index.md, modules/phymars/simpleclouds_mod.md, modules/phymars/updaterad.md
`libf/phymars/waterice_tifeedback_mod.F90`	`libf/phymars`	`has_page`	`covered`	waterice_tifeedback_mod.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, themes/water-cycle.md
`libf/phymars/watersat_mod.F90`	`libf/phymars`	`has_page`	`covered`	water-saturation-helpers.md	modules/libf-overview.md, modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md, themes/radiation.md
`libf/phymars/write_output_mod.F90`	`libf/phymars`	`has_page`	`covered`	write_output_mod.md	architecture/xios-config.md, modules/libf-overview.md, modules/phymars/comm_wrf.md, modules/phymars/index.md, modules/phymars/nonoro_gwd_mix_mod.md
`libf/phymars/writediagfi.F`	`libf/phymars`	`has_page`	`covered`	writediagfi.md	modules/libf-overview.md, modules/phymars/def_var.md, modules/phymars/index.md, modules/phymars/iniwrite.md, modules/phymars/write_output_mod.md
`libf/phymars/writediagmicrofi.F`	`libf/phymars`	`has_page`	`covered`	writediagmicrofi.md	modules/phymars/def_var.md, modules/phymars/index.md, modules/phymars/iniwrite.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/writediagsoil.F90`	`libf/phymars`	`has_page`	`covered`	writediagsoil.md	modules/phymars/def_var.md, modules/phymars/index.md, modules/phymars/write_output_mod.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/wstats_mod.F90`	`libf/phymars`	`has_page`	`covered`	wstats_mod.md	modules/phymars/index.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/xios_output_mod.F90`	`libf/phymars`	`has_page`	`covered`	xios_output_mod.md	architecture/xios-config.md, modules/libf-overview.md, modules/phymars/dimphy.md, modules/phymars/index.md, modules/phymars/write_output_mod.md
`libf/phymars/yamada4.F`	`libf/phymars`	`has_page`	`covered`	yamada4.md	modules/phymars/index.md, modules/phymars/turb_mod.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/yoegwd_h.F90`	`libf/phymars`	`has_page`	`covered`	yoegwd_h.md	modules/phymars/index.md, modules/phymars/sugwd.md, reference/file-index.md, reference/symbol-index.md
`libf/phymars/yomlw_h.F90`	`libf/phymars`	`has_page`	`covered`	yomlw_h.md	modules/phymars/index.md, modules/phymars/lwb.md, modules/phymars/lwdiff.md, modules/phymars/lwtt.md, modules/phymars/lwu.md, themes/radiation.md
`util/aeropt_mod.F90`	`util`	`has_page`	`covered`	aeropt_mod.md	modules/util/index.md, reference/file-index.md, reference/symbol-index.md
`util/aeroptical.F90`	`util`	`has_page`	`covered`	aeroptical.md	modules/util/index.md, reference/file-index.md, reference/symbol-index.md
`util/check_co2cycle.F90`	`util`	`has_page`	`covered`	check_co2cycle.md	modules/util/index.md, reference/file-index.md, reference/symbol-index.md
`util/concatnc.F90`	`util`	`has_page`	`covered`	concatnc.md	architecture/project-structure.md, modules/util/index.md, reference/file-index.md, reference/symbol-index.md
`util/expandstartfi.F90`	`util`	`has_page`	`covered`	expandstartfi.md	modules/util/index.md, reference/file-index.md, reference/symbol-index.md
`util/extract.F90`	`util`	`has_page`	`covered`	extract.md	architecture/project-structure.md, modules/util/index.md, modules/util/zrecast.md, reference/file-index.md, reference/symbol-index.md
`util/extractcolumnfor1D.F90`	`util`	`has_page`	`covered`	extractcolumnfor1D.md	modules/util/index.md, reference/file-index.md, reference/symbol-index.md
`util/gencol.F90`	`util`	`has_page`	`covered`	gencol.md	architecture/project-structure.md, modules/util/index.md, reference/file-index.md, reference/symbol-index.md
`util/hrecast.F90`	`util`	`has_page`	`covered`	hrecast.md	architecture/project-structure.md, modules/util/index.md, reference/file-index.md, reference/symbol-index.md
`util/localtime.F90`	`util`	`has_page`	`covered`	localtime.md	architecture/project-structure.md, modules/util/index.md, reference/file-index.md, reference/symbol-index.md
`util/lslin.F90`	`util`	`has_page`	`covered`	lslin.md	architecture/project-structure.md, modules/util/index.md, reference/file-index.md, reference/symbol-index.md
`util/simu_MCS.F90`	`util`	`has_page`	`covered`	simu_MCS.md	architecture/project-structure.md, modules/util/index.md, reference/file-index.md, reference/symbol-index.md
`util/solzenangle.F90`	`util`	`has_page`	`covered`	solzenangle.md	modules/util/index.md, reference/file-index.md, reference/symbol-index.md
`util/startarchive2icosa/rearrange_startphy.f90`	`util`	`has_page`	`covered`	startarchive2icosa.md
`util/startarchive2icosa/start_archive2icosa.f90`	`util`	`has_page`	`covered`	startarchive2icosa.md
`util/streamfunction.F90`	`util`	`has_page`	`covered`	streamfunction.md	modules/util/index.md, reference/file-index.md, reference/symbol-index.md
`util/xvik/fit_Iceinertia_MONSicedepth.F`	`util`	`has_page`	`covered`	fit_Iceinertia_MONSicedepth.md	modules/util/index.md, modules/dynphy_lonlat/xvik.md, reference/file-index.md, reference/symbol-index.md
`util/zrecast.F90`	`util`	`has_page`	`covered`	zrecast.md	architecture/project-structure.md, architecture/z2sig-config.md, modules/util/index.md, reference/file-index.md, reference/symbol-index.md

Maintenance Rules

Update this matrix after any batch of file-module pages, or regenerate it from source when many pages land.
Do not treat mentioned_only as reproducible coverage. It only means another page names the file.
A file can be considered has_page only when a page documents its own module/subroutine/function structure and reproduction notes.
Parent theme pages should use this matrix to avoid assuming that a mentioned dependency has been fully documented.